Sample identity
- Trajectory ID
- RDB000007__1AQ4_1_B
- Source structure
- 1AQ4_1_S
- Length
- 14 nt
- Canonical chain set
- B
- Partition
- train
MD-derived metadata
2.72 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 10.34 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B
AUGAGGAUUACCCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | S |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
b091ce580733790d8fa9ffaf148d168f851226d5019f815f7509759feafa3d39
rna.gro · SHA-256
733df05fa5602160c2fb539dd667f7bb3a433cf82c83af9e8970450569550667
rna.pdb · SHA-256
a6258ab5624bb4da38217f7f774beb1c89c3910f4be31c228b1c23f86bb8feb0