Sample identity
- Trajectory ID
- RDB000164__1T0E_1_A-B
- Source structure
- 1T0E_1_A-C
- Length
- 35 nt
- Canonical chain set
- A-B
- Partition
- train
MD-derived metadata
2.81 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 16.57 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A → B
GGUGGUGAAGUCGCUCGGCGAGCGUCACACCACCC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | A |
| B | B | B | C |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
2be7135ad9490d735a8dc083d6488af0eacf6080f245740636821350c771b02b
rna.gro · SHA-256
a211cd378b77f9a238e3ee9322b491acfc775064e8a1e384836208e8798bb742
rna.pdb · SHA-256
c340787f00cba01359f20d746267013632494b9b4bb0dd45d6ae85f8a0ca0001