Sample identity
- Trajectory ID
- RDB000167__1TFW_1_A-B
- Source structure
- 1TFW_1_H-E
- Length
- 25 nt
- Canonical chain set
- A-B
- Partition
- train
MD-derived metadata
1.62 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 14.25 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A → B
GCGGAUCCGCACGCGGAUCCGCACC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | E |
| B | B | B | H |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
292f1efd70d84e395900c8d9759bc323a0c28c79d6c792c23b860dab70243d90
rna.gro · SHA-256
216c6f7cc5ba8fcbbc1d5d85567f32b97601fe0ff9b9cb0ddee7306804552da1
rna.pdb · SHA-256
c6ef66ac18c8f457b4662dcf4458dc2961900dfd4cde6918c50b859a4a640c5b