Sample identity
- Trajectory ID
- RDB000202__1YXP_1_A-B
- Source structure
- 1YXP_1_A-B
- Length
- 46 nt
- Canonical chain set
- A-B
- Partition
- guard
MD-derived metadata
3.03 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 19.56 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A → B
CUUGCUGAAGUGCACACAGCAAGCUUGCUGAAGUGCACACAGCAAG
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | A |
| B | B | B | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
44de6c05ce8a92679d25dd44ae23a1f00d333eb0c8874004eb0b4d2748b72d9f
rna.gro · SHA-256
9843be1971936380e748a88a43826e384d1e723a0a3c854c3eab718367726d27
rna.pdb · SHA-256
f3adfac04e81b469758781e196416ccbfb868f3c33bb5d28757d61ad67c3d4f7