Sample identity
- Trajectory ID
- RDB000232__205D_1_A-B
- Source structure
- 205D_1_A-B
- Length
- 24 nt
- Canonical chains
- A, B
- Partition
- train
MD-derived metadata
1.87 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 12.94 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
GGACUUUGGUCCGGACUUUGGUCC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | A |
| B | B | B | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
fe1c490cd83a1a0e8fb3dd18a688e3b8eb56cdd7cccabe2b275c0f1c9d8da31e
rna.gro · SHA-256
e5ac0892dcc98414d64943f9ee3db1978e3fc19e3491e58e1d2fcf63c58ab33c
rna.pdb · SHA-256
a3ced894c285373163f9345abb173103fd2d7de75ab69a5f805b112adf608a9d