Sample identity
- Trajectory ID
- RDB000254__2B57_1_A
- Source structure
- 2B57_1_A
- Length
- 65 nt
- Canonical chain set
- A
- Partition
- test_struct
MD-derived metadata
2.95 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 19.63 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A
GACAUAUAAUCGCGUGGAUAUGGCACGCAAGUUUCUACCGGGCACCGUAAAUGUCCGAUUAUGUC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | A |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
2bfe703b111854cd0384706028344170ca3862710a840677ffe781b87d4b933a
rna.gro · SHA-256
f41416a1a3652e25b0ac5310a0c88e8851e3ccb775daf37b56e7913294b6f900
rna.pdb · SHA-256
c7242439d02a7ba680a1f46b27028e95bc4c06d5da29f3d54293c8ddedf62d4a