Sample identity
- Trajectory ID
- RDB000284__2DEU_1_B
- Source structure
- 2DEU_1_D
- Length
- 74 nt
- Canonical chain set
- B
- Partition
- train
MD-derived metadata
4.93 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 23.70 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B
GUCCCCUUCGUCUAGAGGCCCAGGACACCGCCCUUUCACGGCGGUAACAGGGGUUCGAAUCCCCUAGGGGACGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | D |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
7b223ea2704384447b0ffba2fb2c82307f68784bd7f32fe0f831e19f0fd4a6ea
rna.gro · SHA-256
ac446cc06399a2b95ba42683825b8a6dfa1bbcbf845724931313990b4dfbfb31
rna.pdb · SHA-256
78c26084955a103798f5bb5eb8c69b618dd8be22032f0e7eea4395ae92f1b0d4