Sample identity
- Trajectory ID
- RDB000286__2DR5_1_A
- Source structure
- 2DR5_1_B
- Length
- 32 nt
- Canonical chains
- A
- Partition
- train
MD-derived metadata
4.02 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 15.44 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
GGCCCGGGGCGGUUCGAUUCCGCCCUGGGCCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
675acbaf93386453939149ec2824e39e119ba9da8528e8768ff316c42b2bade6
rna.gro · SHA-256
9da24a2a5e93933d2092c0ddf23eb7c33c74a4de331515c90be24e5b826279de
rna.pdb · SHA-256
a213c0d85fd4f14b832f13a79d53cf9849280411ec815dd32fb039fdc6bd862e