Sample identity
- Trajectory ID
- RDB000299__2EC0_1_A-B
- Source structure
- 2EC0_1_B-C
- Length
- 15 nt
- Canonical chain set
- A-B
- Partition
- train
MD-derived metadata
1.10 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 10.29 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A → B
AUGGGCCCGGGCCCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | B |
| B | B | B | C |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
9f719ff16625faf242eda5ff33d2595a72141ac92a497a9e7e010dc9a375f86a
rna.gro · SHA-256
0209e2f15575cda775626ef9b10400f3b3f15de42272e85a553fc14204d5c416
rna.pdb · SHA-256
1d620102650039a28dcbe74463ff836ccdc1d864e96f84c1481ffd329c41a4d9