Sample identity
- Trajectory ID
- RDB000385__2QUX_1_A
- Source structure
- 2QUX_1_C
- Length
- 25 nt
- Canonical chain set
- A
- Partition
- train
MD-derived metadata
3.76 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 13.44 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A
GGCACAGAAGAUAUGGCUUCGUGCC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | C |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
8242fae13ddc5973258db2eafd1f4cbd9c08c348a6473ec4ef6a44dcffa1a55e
rna.gro · SHA-256
acb70bcaaba00aa8052e7a129cdf539f0208952a2c13fdd137a16b99316631e4
rna.pdb · SHA-256
e57002b21ce09d3b198f31560d1d0b5e80f7c95df276904f9a0f1f706e395e47