Sample identity
- Trajectory ID
- RDB000478__3BNO_1_A-B
- Source structure
- 3BNO_1_A-B
- Length
- 42 nt
- Canonical chain set
- A-B
- Partition
- train
MD-derived metadata
4.15 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 18.95 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A → B
GCGUCACCUCGAACAAGUCGCGCGUCACCUCGAACAAGUCGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | A |
| B | B | B | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
b16fe69324f70912a7f90ca6ab5d73bd1b2a64360c7b60870b39fec3e7b729e7
rna.gro · SHA-256
8762a01c6fc8968cafd68481e0f59ba8968296f3345fb84b44e7a5942c9e36e7
rna.pdb · SHA-256
0417e8389547ea44b5c13baa543ae955410e839073b9fd58658f07353f907d27