Sample identity
- Trajectory ID
- RDB000616__3NMU_1_D-I
- Source structure
- 3NMU_1_D-I
- Length
- 47 nt
- Canonical chain set
- D-I
- Partition
- train
MD-derived metadata
6.96 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 23.05 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: D → I
GCCGUUGAAGCUCUGACCGAAAGGCGUGAUGAGCGAGCUUCAACGGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| D | D | D | D |
| I | I | I | I |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
b242baa58b13121740c1c3bbc553d58a059d74e4e5435ed6e5deb863595723a5
rna.gro · SHA-256
b189f4199e51a5b6c9e545f280afc07b01d09e1ab30197b6466cdb99501f78ef
rna.pdb · SHA-256
17d62c79382a6cb1a2ed38a180bb3283d6180ceabfe92a3f51d5175d0d11cc01