Sample identity
- Trajectory ID
- RDB000689__3SN2_1_B
- Source structure
- 3SN2_1_B
- Length
- 29 nt
- Canonical chain set
- B
- Partition
- train
MD-derived metadata
3.61 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 14.64 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B
GAUUAUCGGAAGCAGUGCCUUCCAUAAUC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
edc0705af57081776bea68e52659b1ddfc6c239460f8a8f4a1335a2a17c63f54
rna.gro · SHA-256
5a917888a3391dfd65f16496191a0ff920895a5f885ee78e1b8a98fd0ff5936f
rna.pdb · SHA-256
4957765468e2e8c130ba35831579e9875a419d15b9d5e712e91851dbecca3b25