Sample identity
- Trajectory ID
- RDB000731__462D_1_A-B
- Source structure
- 462D_1_B-A
- Length
- 46 nt
- Canonical chain set
- A-B
- Partition
- guard
MD-derived metadata
1.98 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 19.53 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A → B
CUUGCUGAGGUGCACACAGCAAGCUUGCUGAGGUGCACACAGCAAG
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | A |
| B | B | B | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
9843cd397d95fa08326ba3b898a0af7a8632e68f6124fbd1028a49f112c1a30e
rna.gro · SHA-256
4db170da8ca47829265ca77230566b000ccf5af5400172c49725fc4a8803a8a0
rna.pdb · SHA-256
1ffe0a94524922a0fbc0e2554443c9826654aaef89df4f453dc5ee45f939c7b7