Sample identity
- Trajectory ID
- RDB000737__4A36_1_C-D-E-F
- Source structure
- 4A36_1_R-S
- Length
- 74 nt
- Canonical chain set
- C-D-E-F
- Partition
- train
MD-derived metadata
9.60 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 30.19 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: C → D → E → F
GCAUGCGACCUCUGUUUGAUCAAACAGAGGUCGCAUGCGCAUGCGACCUCUGUUUGCAAACAGAGGUCGCAUGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| C | C | C | R |
| D | D | D | S |
| E | E | E | T |
| F | F | F | U |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
95f0d61c4b064f046fe6461e521a46e4ebd23da3a8a6cd55bcfdfc23bb95fb2d
rna.gro · SHA-256
6563d5e9eb537ebe71dfbd4e0b0676f9f04f50a002f16bf6d21efd777da645df
rna.pdb · SHA-256
82aac168a5344c955c0a1a9fc73fbce3d972c8f369513e2af6ecf219bd088111