Sample identity
- Trajectory ID
- RDB000759__4DR4_1_V-W
- Source structure
- 4DR4_1_W-V
- Length
- 18 nt
- Canonical chain set
- V-W
- Partition
- train
MD-derived metadata
1.76 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 11.14 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: V → W
UUUGGGAUUGAAAAUCCC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| V | V | V | V |
| W | W | W | W |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
35fc44089d4e01811beb0d110c86e8d263bdd6a5a1c272bed157d80932bfeaa8
rna.gro · SHA-256
f07c034d5c9595e63d64591c87b6a2b50bddff87e5db63822cc3160b8c181d33
rna.pdb · SHA-256
3566f50c318477d7a4660b59d80a60e01328d6c768add95943ae0b9788e05d29