Sample identity
- Trajectory ID
- RDB000780__4FRG_1_B
- Source structure
- 4FRG_1_X
- Length
- 84 nt
- Canonical chain set
- B
- Partition
- train
MD-derived metadata
8.50 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 24.20 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B
GGCCUAAAAGCAUAGUGGGAAAGUGACGUGAAAUUCGUCCAGAUGCGAAAGCAUACGGUUAUACUCCGAAUGCCACCUAGGCCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | X |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
29f1d8cfc31c2072cb0d2732d7e038bebea0ecc5b2880118cf98e9b97f7f4e3e
rna.gro · SHA-256
d537edcefdeeef4bfa02bc75403720a73ca62524cf6c44b3d9e96f7d055b24e6
rna.pdb · SHA-256
fbd824d00b6181e7f7b2f4c9c8e463bd7af63c8b697ce4d4acc26f38f6d90128