Sample identity
- Trajectory ID
- RDB000787__4FVU_1_B-C
- Source structure
- 4FVU_1_B-C
- Length
- 16 nt
- Canonical chain set
- B-C
- Partition
- train
MD-derived metadata
1.28 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 10.53 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B → C
GGAGGGAGCUCCCUCC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | B |
| C | C | C | C |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
86f6648365e11c877aa14e39efa895998e6b23065384d7028d7833f6a43ab79c
rna.gro · SHA-256
12487b4548c09e55031a8e2044db817e736528a760acaf1746fc11e844aa20ba
rna.pdb · SHA-256
f9e07c6a0a51f3082a3d428ef44c9e27732b542009aa1b8368326dc8cb8eeb14