Sample identity
- Trajectory ID
- RDB000839__4KR7_1_C
- Source structure
- 4KR7_1_M
- Length
- 39 nt
- Canonical chain set
- C
- Partition
- train
MD-derived metadata
3.96 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 18.06 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: C
GCCCGGAUAGUGUCCUUGGGAAACCAAGUCCGGGCACCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| C | C | C | M |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
3fa9978e32f354599c6000203eb37634f9af822c6b7cc8f8a21748afb8fb558d
rna.gro · SHA-256
46581c28e80c351f9f40ce8ffabbd34f655a4a557c3c6de2c993432e933808b5
rna.pdb · SHA-256
b778f8b5943f152f09eb653e860e9595c8e4291fbdc8ef81caba8db7eb84b975