Sample identity
- Trajectory ID
- RDB000843__4KTG_1_B-C
- Source structure
- 4KTG_1_E
- Length
- 38 nt
- Canonical chains
- B, C
- Partition
- train
MD-derived metadata
2.60 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 16.82 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
GCGGCGGCGGCGGCGGCGCGCGGCGGCGGCGGCGGCGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | B |
| C | C | C | E |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
3a3a4ba8bcef1c5a60c51b19d0579ab141c5e2dff6783a8ae5cc316c97ffc522
rna.gro · SHA-256
abbabca9a324d12d54bfa1d8853b5edab9ba5fb6aecca36047ef287a55796629
rna.pdb · SHA-256
0716fb8d4f6ac050011eb56afea0005b072e2428aff7aac1ead865c5d6f10b26