Sample identity
- Trajectory ID
- RDB000845__4L8R_1_A
- Source structure
- 4L8R_1_A
- Length
- 26 nt
- Canonical chain set
- A
- Partition
- train
MD-derived metadata
6.99 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 15.89 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A
CCAAAGGCUCUUUUCAGAGCCACCCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | A |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
4a42e8b0765707c7c1f83a74aa1a12b80f81b5f0604a7760ecb2c9777af1b09f
rna.gro · SHA-256
0a518b0a48d7ca5caf29db148328944fc4f00dd20c7a16b18a94012271fb838a
rna.pdb · SHA-256
3720028f6d4913eedda0ed2f65f6efd086b185d229d7ec33d5f5a8431fdcde3c