Sample identity
- Trajectory ID
- RDB000859__4M4O_1_B
- Source structure
- 4M4O_1_B
- Length
- 59 nt
- Canonical chain set
- B
- Partition
- train
MD-derived metadata
3.56 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 21.18 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B
GGGUUCAUCAGGGCUAAAGAGUGCAGAGUUACUUAGUUCACUGCAGACUUGACGAACCC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
df63a070a89cc0f37479942225a8dc963b807259d10c6131708ebf43d9c959f9
rna.gro · SHA-256
a1e1343b14ffce9c01363cc23fb5888ce8c39ed54e0495d5bd3b6582efe650d2
rna.pdb · SHA-256
69eb831a3a58d763c1a545f79152c194ff729d3686b87da685c53c51f9063923