Sample identity
- Trajectory ID
- RDB000901__4PHY_1_A-B
- Source structure
- 4PHY_1_A-B
- Length
- 46 nt
- Canonical chain set
- A-B
- Partition
- train
MD-derived metadata
3.11 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 20.82 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A → B
CGUGCUCCCCACCUCGGAUCACUGCGGCAGGAACCGAGAGGCACGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | A |
| B | B | B | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
139e5669ef06fb7d57c08847e9ea1e955b5d755ad12039e0ec1eb83477a99fa7
rna.gro · SHA-256
002081bab89997f6d76f1ee52ab2fb3346e01d4099ca062e3759630d3fbd5112
rna.pdb · SHA-256
4774bfd0519749bdeac3f70c2f814f7ed515d172062f30567b1db68170d43db2