Sample identity
- Trajectory ID
- RDB000922__4QOZ_1_D
- Source structure
- 4QOZ_1_D
- Length
- 18 nt
- Canonical chain set
- D
- Partition
- train
MD-derived metadata
5.39 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 14.15 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: D
UCUUUUCAGAGCCACCCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| D | D | D | D |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
1f43f327838db22989ab759b48675fcc378b5e4ca42cc0a3a79a97b9af2b5fc8
rna.gro · SHA-256
b3ba36a7158bf0807c1a5f3d3baae8a6517384168520e409374dc6365e7e666a
rna.pdb · SHA-256
6d7159f2cce362194208b1242e1f7005005b00c9b3d5cb1d6bfb7c566e232a01