Sample identity
- Trajectory ID
- RDB000953__4V4P_1_KA
- Source structure
- 4V4P_1_BC
- Length
- 76 nt
- Canonical chain set
- KA
- Partition
- train
MD-derived metadata
4.87 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 23.78 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: KA
GCGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAGAUCUGGAGGUCCUGUGUUCGAUCCACAGAAUUCGCACCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| KA | A | KA | BC |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
3a95a8f2637fb9de5b3e4e42099903da85414c96d293b659702dd855e64413a7
rna.gro · SHA-256
776d97f6d2edb29c83284844df891ea8a54812c96109854b0bb7af067c646015
rna.pdb · SHA-256
d314fa9f3692db0481175a22242da37774e0ca9619a48237f415075348efc779