Sample identity
- Trajectory ID
- RDB000964__4V4Z_1_C
- Source structure
- 4V4Z_1_AD
- Length
- 76 nt
- Canonical chain set
- C
- Partition
- train
MD-derived metadata
5.41 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 24.74 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: C
GCCGAGGUAGCUCAGUUGGUAGAGCAUGCGACUGAAAAUCGCAGUGUCGGCGGUUCGAUUCCGCUCCUCGGCACCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| C | A | C | AD |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
859e7244770cb85d5b9379b1ac7673aa2b9efa2a1a8e26f5ededd83f983892b2
rna.gro · SHA-256
1ab032d731240da67d33fbdfaf5a10176578edc8e4aeeb266e52be86b9206738
rna.pdb · SHA-256
a15b05f51bca1ab1ac5f8cff717a18bfe5dd67a588942bfcf2dda80f6846738e