Sample identity
- Trajectory ID
- RDB001005__4V6X_1_KA
- Source structure
- 4V6X_1_BC
- Length
- 75 nt
- Canonical chain set
- KA
- Partition
- train
MD-derived metadata
3.75 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 23.35 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: KA
AGCAGAGUGGCGCAGCGGAAGCGUGCUGGGCCCAUAACCCAGAGGUCGAUGGAUCGAAACCAUCCUCUGCUACCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| KA | A | KA | BC |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
da3f5ea0d8558c91d0b3594cae2fd5ba31233e0df8035c72fbd67d19bfa8730d
rna.gro · SHA-256
291a3722badd6f519954bd642aba775cb1b54bf0ba22c9094b2a31290f27200d
rna.pdb · SHA-256
f218ca961b79d7cef54e897f9ad8593fad100b4e3361928b5a0f46b21dd82aaa