Sample identity
- Trajectory ID
- RDB001023__4V8N_1_CC
- Source structure
- 4V8N_1_CW
- Length
- 78 nt
- Canonical chains
- CC
- Partition
- train
MD-derived metadata
4.67 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 23.28 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
GGGCCCUUAGCUUAGUCUGGUUAAAGCGAUCGGCUCAUAACCGAUUGGGCGCUGGUUCGAAUCCGGCAGGGCCCACCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| CC | A | CC | CW |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
2331fe8ada0fa342956ab593b2e894c81608bdcb5bc50ac34b4d32282a539beb
rna.gro · SHA-256
2944a965571b9fa433bd67d66ad567b33a1f1ee12f0247618102b4e88291169a
rna.pdb · SHA-256
c3a03b9133fd2542a8b03bdb2d266075e3abe4c71baadc6224f18d325049e0c2