Sample identity
- Trajectory ID
- RDB001049__4WR6_1_XB
- Source structure
- 4WR6_1_1L
- Length
- 85 nt
- Canonical chain set
- XB
- Partition
- train
MD-derived metadata
5.53 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 24.69 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: XB
GGUGGGGUUCCCGAGCGGCCAAAGGGAGCAGACUGUAAAUCUGCCGUCAUCGACUUCGAAGGUUCGAAUCCUUCCCCCACCACCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| XB | A | XB | 1L |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
d0c2c8b2390ba10ac2c750ced05561f7998f0a1b91c4df57ed3354ba459a80d2
rna.gro · SHA-256
7e45277ab49dcabe200232d6af078ec4d793709c5a545340ebcdadef33f9b0bf
rna.pdb · SHA-256
ea446be7a036a1d7dd42df64a396d28b608c0b1c0e4dace0058d57ef7dd85a8e