Sample identity
- Trajectory ID
- RDB001063__4X0B_1_B
- Source structure
- 4X0B_1_B
- Length
- 77 nt
- Canonical chain set
- B
- Partition
- train
MD-derived metadata
4.89 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 24.71 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B
GGGCCAGGUAGCUCAGUUGGUAGAGCACUGGACUGAAAAUCCAGGUGUCGGCGGUUCGAUUCCGCCCCUGGCCCACC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
ebf5f7e252025ae58fa4e4871d5774ae00c5c693f125d5fb61a4446ae8cc246c
rna.gro · SHA-256
17367231f2995c6ee01e454e0bf38a5c308348cdad19047cd680567cb450ec2c
rna.pdb · SHA-256
a99c9577d04af586ef92f47496c5a67c1c8de46c3e202f8442806db9376116e4