Sample identity
- Trajectory ID
- RDB001133__5F5H_1_C
- Source structure
- 5F5H_1_C
- Length
- 21 nt
- Canonical chain set
- C
- Partition
- train
MD-derived metadata
3.53 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 12.90 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: C
CCACACCGUUCUAGGUGCUGG
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| C | C | C | C |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
058f52e13316ae309cc144ec1167c6e2853c75fcaa3c3b69b28256fc4935747a
rna.gro · SHA-256
18a70742618b3409cf3a1995bd549e04a66200633343010133a93a63fde9d3cf
rna.pdb · SHA-256
ffa88f661dd4d53b686ff58eaa375cb159e9e6f063466e866baf3489e265c942