Sample identity
- Trajectory ID
- RDB001160__5FJ4_1_H
- Source structure
- 5FJ4_1_H
- Length
- 35 nt
- Canonical chain set
- H
- Partition
- test_flex
MD-derived metadata
3.67 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 17.54 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: H
GAGGGAGCGCCAUUGCACUCCGGUGCGAAGAACUC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| H | H | H | H |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
b7c0a5331fd3399621cf0d68ed7713af63139fff5f2be7ef04f3762399b0a0f5
rna.gro · SHA-256
5eb5ac3dc3b02cb0c752a3c1f2418ca79c4de7dd3f1132570a03ad1b9b344a2d
rna.pdb · SHA-256
5ee85288b0493049ae16070a5ba6ad4a428b7aa96dd665ecedaba3382acffe7d