Sample identity
- Trajectory ID
- RDB001357__6ALF_1_C
- Source structure
- 6ALF_1_R
- Length
- 12 nt
- Canonical chain set
- C
- Partition
- train
MD-derived metadata
6.98 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 14.04 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: C
AGCGGAGAGGUA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| C | C | C | R |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
dfb7c91e395862ef2635b94a404c7ef5868cc1ab711fc751b86f8c900f2deccc
rna.gro · SHA-256
b1addef0e4c2b207bff99aacf77875a0e73d25e721a42e47858782e7788c129b
rna.pdb · SHA-256
0d5cd38adcbcbcce583e2fb6990d13f0911ac1e79b4f59d8c1d13aa76bea8824