Sample identity
- Trajectory ID
- RDB001376__6BJH_1_C-D
- Source structure
- 6BJH_1_C
- Length
- 42 nt
- Canonical chains
- C, D
- Partition
- train
MD-derived metadata
4.54 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 19.15 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
UCGAAGUAUUCCGCGUACGUUCGUACGCGGAAUACUUCGAUU
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| C | C | C | C |
| D | D | D | D |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
ac43ff7bcc1d450e13c6be5ba64232bb42e7c28629b62b8d2cda54088546049d
rna.gro · SHA-256
abf286ce85e38d195458c473fbd5c2a73f53a0f0ef66530412afb4b365b7c942
rna.pdb · SHA-256
0e6d69816b0b9400a0e246d1721d002b01f201c25ac2a5144c2c8742ac5cbe48