Sample identity
- Trajectory ID
- RDB001383__6BY1_1_D
- Source structure
- 6BY1_1_AV
- Length
- 76 nt
- Canonical chains
- D
- Partition
- train
MD-derived metadata
5.41 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 23.71 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
GGGUGAUUAGCUCAGCUGGGAGAGCACCUCCCUUACAAGGAGGGGGUCGGCGGUUCGAUCCCGUCAUCACCCACCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| D | A | D | AV |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
4a7da1a463a08c5ccbf594bec990c5dbef115f8af26d99fce6d14c780c463a9f
rna.gro · SHA-256
83c53b27fb01356635ddd356dfe631523e859e6f8d6f5d4733efee3029a8dd4c
rna.pdb · SHA-256
f5c7eca5d5121618123537adb23374c86b795f18d53c8145f55b988a0ea8f770