Sample identity
- Trajectory ID
- RDB001400__6CAQ_1_V-W
- Source structure
- 6CAQ_1_W-Y
- Length
- 21 nt
- Canonical chain set
- V-W
- Partition
- train
MD-derived metadata
2.51 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 12.63 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: V → W
UUUUUUGGGAUUGAAAAUCCC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| V | V | V | Y |
| W | W | W | W |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
9365db719c1fbd7d28fde530449471b3b29844a4731a91eda76110113548bc90
rna.gro · SHA-256
53e7a7fc6f6085b5786965f7f6b53c4d87f8b287b18ae41ac478b54cfbaf8f14
rna.pdb · SHA-256
6e1a691e7f741b39441b04a5e1f88770115d88b6eae2c9580f1d8e09258d71c5