Sample identity
- Trajectory ID
- RDB001482__6GQV_1_DC
- Source structure
- 6GQV_1_AY
- Length
- 76 nt
- Canonical chains
- DC
- Partition
- train
MD-derived metadata
5.63 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 23.69 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
GCGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAGAUCUGGAGGUCCUGUGUUCGAUCCACAGAAUUCGCACCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| DC | A | DC | AY |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
b2243a7901f75ee7cf2cbce60a3e4497835a54b4fbd250b95318493c524d1e86
rna.gro · SHA-256
612ca223a074b1157013154be219bdb8709d0ceee7331fa53229b732abb4f181
rna.pdb · SHA-256
add06836c96f4a26a1f60bf14f7327dc358c603767c8c100f017ce2b00a918fe