Sample identity
- Trajectory ID
- RDB001528__6IFO_1_B
- Source structure
- 6IFO_1_C
- Length
- 88 nt
- Canonical chains
- B
- Partition
- train
MD-derived metadata
15.87 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 29.24 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
UGCGCUUGGCGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUGGCACCGAGUCGGUGCUU
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | C |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
0deea7bf1d855ae07d47f0bd2a8ecfbc65d553f7b1d91fb848ac5cf7e5c2d310
rna.gro · SHA-256
d8c124c7c537883d95bf2f3363823cfce054e266d7ec501e304ad4d80879ef99
rna.pdb · SHA-256
1718d570d53ae86018b7564756fa94fe7241c27b32d81428df6c1cb4aed4cfab