Sample identity
- Trajectory ID
- RDB001532__6IFY_1_I-J
- Source structure
- 6IFY_1_I-J
- Length
- 62 nt
- Canonical chain set
- I-J
- Partition
- train
MD-derived metadata
17.94 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 28.49 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: I → J
ACGGAAACGCUUUCUAGCUCGCUAUAAUUACCCAAAUGGGUAAUUAUAGCGAGCUAGAAAGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| I | I | I | I |
| J | J | J | J |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
0d0660934d477975a53b51e57bc472cca2a4fadc0d30f2ac22e05547b4aec198
rna.gro · SHA-256
72a3e37b3a975e753f71b99b126e1effca815d5e6c6459029ae831e373c629b4
rna.pdb · SHA-256
da2632f08e4201a5b6ac2833977794bf28e75a43ef0763e145edb55668f74bfb