Sample identity
- Trajectory ID
- RDB001620__6O8W_1_W
- Source structure
- 6O8W_1_B
- Length
- 116 nt
- Canonical chains
- W
- Partition
- train
MD-derived metadata
8.43 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 34.37 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
UGUGGUGGCGAUAGCGAGAAGGAUACACCUGUUCCCAUGCCGAACACAGAAGUUAAGCUUCUUAGCGCCGAUUGUAGUGAAGGGUUUCCCUUUGUGAGAGUAGGACGUCGCCACGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| W | W | W | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
1b20a3e818d87b8858551e7d1ce50878c4e1b673af49dc8e2bdfc97c98f0c256
rna.gro · SHA-256
34ea248b9ff6cc72c752ceb2a5c3e982e9c61c892a912e7a00533f93d37f68a5
rna.pdb · SHA-256
ee58f4c83d37ecee0e0d38f50aac161b55366eb33555e98c4dddfb547d791106