Sample identity
- Trajectory ID
- RDB001628__6OGG_1_AB
- Source structure
- 6OGG_1_5
- Length
- 73 nt
- Canonical chain set
- AB
- Partition
- train
MD-derived metadata
5.04 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 21.91 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: AB
CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGUCGGUUCAAAUCCGGCCCCCGCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| AB | A | AB | 5 |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
90a800711d75c463773ef8471e14b90d36def462a6eb70e3625812b86ad22f3f
rna.gro · SHA-256
1899a7587fbb1d4ff86009053aa16f49c2bf151e2a28ec5102ef4f3f80623e2a
rna.pdb · SHA-256
e1c1ffe6476ef5b7b4d69e54cc8db383eb20028773853c17da95508e763fe6ad