Sample identity
- Trajectory ID
- RDB001647__6P5I_1_IA
- Source structure
- 6P5I_1_1
- Length
- 205 nt
- Canonical chains
- IA
- Partition
- train
MD-derived metadata
10.91 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 43.78 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
CAUCAUUCUAUGGUUACCCAUCAUUAGAGGAAAUUUCCAAUAAACUCUGGUGUAAGGCUUAGAGUGAUGGUCGAGGUGCCCUAUUUAGGGUGAGGAGCCUCGGUGGCAGCCCCACCAAAUCCUCUAUUGGAUAGGAACAGCUGUACUGGGCAGUUACAGCAGUCGUAUGGUAACACAUGCGGCGUUCCGAAAUACCAUGCCUGGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| IA | A | IA | 1 |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
60a9ce5af025da1881d7e2c107d252a368c641a81123fead6e5e4d2961854f79
rna.gro · SHA-256
c35ee9309dc2292722ef63116c6cd03534b8c761c9d076d8f21715f390f99132
rna.pdb · SHA-256
2fb3225ac47c21c2ee3462daae1ac8058fa5fc5ec5a5852aee1c4ac74cf041fa