Sample identity
- Trajectory ID
- RDB001652__6PC6_1_B
- Source structure
- 6PC6_1_J
- Length
- 118 nt
- Canonical chain set
- B
- Partition
- train
MD-derived metadata
5.07 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 33.02 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B
GCCUGGCGGCCGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGUGGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | J |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
212064be170ab02602c5ab74ce7a20161bc4e3347f61e7427f2c70365b73ed7e
rna.gro · SHA-256
0acacb02bcec048aed9c7a56493b6b82544f5739e4819a306b9dcf5b2e60be5f
rna.pdb · SHA-256
1b90c3bd6d3aa2bce481ec594389c67e4a741702a29d956022dc646978bcba41