Sample identity
- Trajectory ID
- RDB001701__6SPF_1_B
- Source structure
- 6SPF_1_B
- Length
- 117 nt
- Canonical chain set
- B
- Partition
- train
MD-derived metadata
6.22 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 35.16 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B
GCUUGACGAUCAUAGAGCGUUGGAACCACCUGAUCCCUUCCCGAACUCAGAAGUGAAACGACGCAUCGCCGAUGGUAGUGUGGGGUCUCCCCAUGUGAGAGUAGGUCAUCGUCAAGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
e7350b7cd2d12606b6ee4333fac1de0b4cf92df265a4c17159524c07c61149c8
rna.gro · SHA-256
39f94935dd2ecb3ed4c53dbc74068b31471447d984088e44772085d9f01cd9c8
rna.pdb · SHA-256
865718cded576d051980491d7bee408520a7f39b5c8436dc2d338bcc17d40986