Sample identity
- Trajectory ID
- RDB001824__6XU6_1_CB
- Source structure
- 6XU6_1_A7
- Length
- 120 nt
- Canonical chains
- CB
- Partition
- train
MD-derived metadata
6.58 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 34.26 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
GCCAACGACCAUACCACGCUGAAUACAUCGGUUCUCGUCCGAUCACCGAAAUUAAGCAGCGUCGCGGGCGGUUAGUACUUAGAUGGGGGACCGCUUGGGAACACCGCGUGUUGUUGGCCU
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| CB | A | CB | A7 |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
08755da979db716b921f0cdf233a34efeff95495eca5eed04f7fcfc409d8cbca
rna.gro · SHA-256
b90131e67f20885344c01e83641ee6861c693e171fb621fa8471ad20c9ba01ed
rna.pdb · SHA-256
150e2fa3404d20576526c9cb082c378534ddbcfab102fe846bc79eb4c91e7a60