Sample identity
- Trajectory ID
- RDB001845__6Z8K_1_B-C
- Source structure
- 6Z8K_1_H-X
- Length
- 15 nt
- Canonical chain set
- B-C
- Partition
- train
MD-derived metadata
7.74 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 14.07 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B → C
GCUAAGUACACUACU
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | X |
| C | C | C | H |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
6ed636a853efabc3861381cc11304647bfa6f26e3b337a69e11dfc1a6db17810
rna.gro · SHA-256
7881968d6c4aea46e1cbf1666aacb48d2995999e2d9f42bfb1ee7e75bb0cdc6f
rna.pdb · SHA-256
e8274eea12848669dc6cf5f7017602220d74e3d59331fc1e75c810c4802fffbe