Sample identity
- Trajectory ID
- RDB001865__7A01_1_A
- Source structure
- 7A01_1_E1
- Length
- 153 nt
- Canonical chains
- A
- Partition
- train
MD-derived metadata
24.12 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 43.81 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
AAAACAUGUGAUCUUAUCACUUUUAUAGUUUAUGAAAUCUUUAUUAUUGUUAUUGCUAUGUUUUAAAUUUCUUUUUCAAAAUUCAUCCUGUUCCAGCAAUGGUUUUAAAGGAACUUGUAUAUGAAAACCGCCACUAUUACAUCAACAACAUCA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | E1 |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: geometry:rmsd_high
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
c77d53e3efafa4ec049110a01163fd1b0f9e7025d3c47715204acc4ad0d8c442
rna.gro · SHA-256
71608d8609068cff28173fffe1e302e72cdf687ec00d6080bdd0c2b9de6b1ab8
rna.pdb · SHA-256
309d89d3d37dbba8866fc3461e5ad35d07636cccccc6829d48f42c802b5f9fa7