Sample identity
- Trajectory ID
- RDB001937__7ECP_1_A-C-D
- Source structure
- 7ECP_1_C-D
- Length
- 36 nt
- Canonical chain set
- A-C-D
- Partition
- val
MD-derived metadata
18.15 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 19.66 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A → C → D
GGGCCCGGUCCCGGGCCCGGUCCCGGGCCCGGUCCC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | A |
| C | C | C | C |
| D | D | D | D |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
4732a330442f00aa694f2f2ab337a6dc3e21ff6d993e0dfedfcdc529b456f7e8
rna.gro · SHA-256
d6817abf2c00845b41ee807995c5ec4ac85bc09fd4e62645ae3f50f50f798ec2
rna.pdb · SHA-256
4086895d275f7d936a47966ab294ee30a6e1efd1912380280caeb9af6cbeb8f4