Sample identity
- Trajectory ID
- RDB001976__7JL1_1_B-C
- Source structure
- 7JL1_1_X-Y
- Length
- 28 nt
- Canonical chain set
- B-C
- Partition
- train
MD-derived metadata
1.91 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 14.12 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B → C
GACUGACUGACUGAUCAGUCAGUCAGUC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | X |
| C | C | C | Y |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
5a3d92a9fb220d45bef566d2dec0ae350b1d9f2a74c492c3a7b2cbcbc2c5b45f
rna.gro · SHA-256
d71b7bfe758bce3fb1fd701c4c95f8b3306bf6d651a0b9bb091ef71b9d12e3b9
rna.pdb · SHA-256
4781814280f3c686f21f8156e4916eb4d0077fa161ea758a70ea958559eed77f