Sample identity
- Trajectory ID
- RDB002020__7M50_1_P-W
- Source structure
- 7M50_1_e-P
- Length
- 19 nt
- Canonical chain set
- P-W
- Partition
- train
MD-derived metadata
6.79 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 12.88 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: P → W
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| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| P | P | P | P |
| W | W | W | e |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
61dee790f607177c3d251e4507c5227d6ee82326321a7558eaa7deed514a73db
rna.gro · SHA-256
4df6a58c9b46b3ff41d74baece8f8860650c2d17d4925fa4560f5c13c28e39e1
rna.pdb · SHA-256
4f03a7bdd3f7d3928c816b8bd05a95a717a543177ed1d6d778ca602219383f04